Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLIVPKEMRDYTIGSGRSLLDIITEYFQELCEKSGFIKKEYRIERNVDNTFVLDRRVNEPAVTNNRKEIS
2ZA4 Chain:B ((2-38))
--------KKAVIN-GEQIRS-ISDLHQTLKKELALPEY---YGENLDALWAALTGWVEYPLVLEWRQFE
General information:
TITO was launched using:
RESULT:
Template:
2ZA4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1727 for 177 contacts (-9.8/contact) +
2D Compatibility (PS) -4029 + (NN) -1547 + (LL) 1488
1D Compatibility (HY) -1200 + (ID) 350
Total energy: -7365.0 ( -41.61 by residue)
QMean score : 0.293
(partial model without unconserved sides chains):
PDB file :
Tito_2ZA4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZA4-query.scw
PDB file :
Tito_Scwrl_2ZA4.pdb
: