Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYKISKLILSALKANKYTKVIVLFSSIFVILFSVIYCNYSLRDNFLSSYRDSSVSLKSVLENSIIKKYHYLLIEKHHIKYKSFDYINQLVKLRAELLQSVGEVKDLGLILYDQNSRIIFSHFNTQDHDYEQLLTNDEIDKLLNNQEIFYTIGHTLISIFPIFHENDTKPSFFLKIIQNHDNFYVMVYSLFLTFLGLLLIILILVMLYLHFSNTQMLVKQHKTNIELQQMKEALEQENTNKLKFFASVTHELRTPLNAIIGFAELIKNETLGSMDNYQYKEYVDDIYNAGTHLLALINDVLDFSKAESSSLTVEKVKFN--LNKIIDSCLNMLSPKLKETGISLEKEIPNRQLLVIADPKRMKQVIINLLSNSIKFTPKDGLIRMVIKENIEKNLLTIEFHDNGIGIMQQDIYKVMSVFGQADSGYRNEGTGIGLPLSKKLVELMGGTFNIKSEAKLGTTITLNFFYEEQTCEDLIDF |
4I5S Chain:A ((211-432)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FVSNVSHELRTPLTSVKSYLEALDD---GALTESVAPSFIKVSLDETNRMMRMITDLLSLSR---SHLDVELTNFTAFMNYILDRFDQIQSQQST----EIIRDYPDKSVWIEIDTDKMTQVIDNILNNAIKYSPDGGKVTITMQTTDTQLILSIS--DQGLGIPKKDLPLIFDRFYRVDKAR-----GLGLAIAKEIVKQHKGFIWANSEEGEGSTFTIVLP------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58819 for 1538 contacts (-38.2/contact) +
2D Compatibility (PS) -20772 + (NN) 615 + (LL) 23204
1D Compatibility (HY) -14800 + (ID) 2850
Total energy: -73422.0 ( -47.74 by residue)
QMean score : 0.321
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