Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNSVIEITSIKRRFCAYLIDMAVLLIPNLLIIILLKNFPLILDLLYMCVNCSYFTYFISSAAQATPGQQLMNIHTISLDGSKINLSLAFDRSISQFFLHLLNNVIAILIELFQEQNELVSALIILGVIMLLLTICWYLVACFSQEKQTYHDMLFDTIVVKGAIK |
2PFX Chain:A ((1-18)) | --------------------------------------------------------------GMTKPKEPTALDLPMADPLPDETQKYFEICQEKLGMVPNVLKAYAFNVEKLNAFTAMYNDLMLGESQLSKLEREMIAVVVSSINKCFYCLVAHGAAVRQLSG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2PFX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 794 for 47 contacts (16.9/contact) +
2D Compatibility (PS) -1832 + (NN) -211 + (LL) 6460
1D Compatibility (HY) 1200 + (ID) 100
Total energy: 6311.0 ( 134.28 by residue)
QMean score : 0.062
|
|
|