Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHSGSQHLFDIIILLSAAVFIVIAFWKMNISPVLGYFVAGALIGSHGFNLIHSAKAMDNFAEFGVVFLLFIIGLELTFERLIAMRIHVFGFGSLQVIVTMVAIWCIALAFGVNTNMAAVIGGGLALSSTAIVLQVLQEKGSQASQVGRLSIAVLLMQDFAVVPLIVLVPLLTGNSENSLISSLTGSLLQAAIALVMIFITGRLLLRPLFSIIARMESNEVFISTTLLIILGAAFITEQFRLSMALGAFVAGLLVAETEHRHSVEHAVLPFKDLLLGLFFMTVGMSINIDLLLNKLPLITLLSIILIVLKTSIIYMLCRFFGFKRAPAIQAGLLLAQGGEFAFILFRLADELNVLPSEIAQVLMMVTTVTMAFTPLLSGLGDWIVNSFSTEKVILDDEAVETDTQDLYNHVIVAGFGRVGYMVTKMLTAEHLSYVVVDIQSKIVKEGKSDSFPIYLGDATRYEILKSVGIGRAQALVISIKNEVTIKKIVSLVATNF-PHVNIIIRLPDLSNAEVYKDLGASKIIPETSEMGLQLGGAALSLSGISESGVASLKSKFRKGNYSMIKDISSDMDE |
| 4GX2 Chain:A ((351-464)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPV---CNDHVVVY-GDATVGQTLRQAGIDRASGIIVTTNDDST-NIFLTLACRHLHSHIRIVARANGEENVDQLYAAGADFVVSNASVGANILGNLLEHK-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GX2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84127 for 864 contacts (-97.4/contact) +
2D Compatibility (PS) -12242 + (NN) -4775 + (LL) 40404
1D Compatibility (HY) -6000 + (ID) 1400
Total energy: -68140.0 ( -78.87 by residue)
QMean score : 0.462
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