Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNFFQKLTGKFCNFFTFKGLFASDIAIDLGTANTLVYQKNQGIVLDEPSVVARIKEKGSYIPYAFGKKAKMMLGKTPGEIEAIRPLKDGVIADFKSAEEMLKYFIRSANTKLTVNKPNIIICVPSGSTPVERRAIQDAAESAGANEVFLIEEPMAAAIGAGLPVTEPEGSMVVDIGGGTTEVAIISLGGIVYSRSA-----RVGGDIMDEAIRSYI----RENHKLLIG---------ETTAEKIKKSLGSA-----SLP----DENNKEWMMVKGRDLVSGMPKEMLLSEYQVAESLIEPVHQIISAIKTALESTPPELSSDIVDKGIVLSGGGGLLRNLGKVISETTKLPVHVADDPLCCVALGSGKVLENMDYFSHVLFKQD |
4ANI Chain:C ((85-344)) | ---------------------------------------------------------------------------TPQEISAI----------------ILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRIAGLEVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHL-------------EMTLTRAKFEELSAHLVERTMGPVRQALQDAG--LTPADIDK-VILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGVIAGEVKDVVLLD |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4ANI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -113675 for 1694 contacts (-67.1/contact) +
2D Compatibility (PS) -25563 + (NN) -11895 + (LL) 6464
1D Compatibility (HY) -9600 + (ID) 3850
Total energy: -158119.0 ( -93.34 by residue)
QMean score : 0.521
|
|
|