Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEEACKTCEESQRELERELENLESQLSAVEKEKEDLENESAELQKQVQTLKEDKKMCKKD
2OQQ Chain:A ((5-39))
-----------LSELENRVKDLENKNSELEERLSTLQNENQMLRHILKN-----------
General information:
TITO was launched using:
RESULT:
Template:
2OQQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7023 for 131 contacts (53.6/contact) +
2D Compatibility (PS) -4156 + (NN) -4350 + (LL) 1992
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -2041.0 ( -15.58 by residue)
QMean score : 0.905
(partial model without unconserved sides chains):
PDB file :
Tito_2OQQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OQQ-query.scw
PDB file :
Tito_Scwrl_2OQQ.pdb
: