Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEQFENFYITTPIYYVNDKPHIGHAYTSLICDVTARFMKLAGKNVKFTTGTDEHGQKIEKAAKTKGMHPKEFTDKVSVSFRKLAEFIDFQYDDFIRTTEERHEKAVVALWDRLEERGQIYLDSYSGWYSVSDEAFYQESELID----------GKAP-TGAEVEWVKEESYFFRLSSWQNKLLELYKNQPNFIFPESRKNEVI-SFVKSGLTDLSISRISFNWGIKVPRNDKHIIYVWVDALTNYLTSIGFPNTENEEYKKFWAESQSVIQVADTWIQKEIQISASRARMTSNLADNSFNIHVIGKDILRFHAVYWPAILLAADLPLPKQIVVHGWWLNEGKKISKSLGNVIDPIALAKEFGVDQLRYFLLREASFGQDGNFSKKNMISRINSELANNIGNLVQRTISFLHKRCFGVVPTVDKSLLKGEEGLPNYR-AIFNQVMDHLSKYEFNHIILLIINISSEANAYIDKSAPWILSKTDRERMNL--VIYKLLEYIRIIGILLQPIVPRPAEVILDQLQIPKEQ-RDLKSL--CGAYVSSGTTLHKPTPVFLRIE |
| 4QRD Chain:A ((31-546)) | ----ETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQKAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGEYEGWYSVPDETYYTESQLVDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTDRLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWIDALVNYISALGYLSDDESLFNKYWPA----------------------------------DIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLANDLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAPKEIFEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFP--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4QRD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -314947 for 4121 contacts (-76.4/contact) +
2D Compatibility (PS) -52541 + (NN) -21323 + (LL) 3964
1D Compatibility (HY) -51200 + (ID) 11000
Total energy: -447047.0 ( -108.48 by residue)
QMean score : 0.474
|
|
|