Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNFTLPELPYDKTALEPYISAKTLDFHYDKHHKGYLNKLNELIENTDYQNVKIEELIMKVHGNSDEVPVFNNAAQVWNHTFYWNSMKKSGGDKPKEDGLLAKKIQDDIGGFDKFHEEFFNHGIGQFGSGWVWLVLER-GKLKITKTPNADLPLIYDQVPLLTMDVWEHAYYLDCQNRRIDYIKIFLDHLINWDFAEENLKKNT
1DT0 Chain:A ((2-194))
--FELPPLPYAHDALQPHISKETLEFHHDKHHNTYVVNLNNLVPGTEFEGKTLEEIVKTSSGG-----IFNNAAQVWNHTFYWNCLSPNAGGQPT--GALADAINAAFGSFDKFKEEFTKTSVGTFGSGWGWLVKKADGSLALASTIGAGCPLTIGDTPLLTCDVWEHAYYIDYRNLRPKYVEAFWN-LVNWAFVAEQFEGKT
General information:
TITO was launched using:
RESULT:
Template:
1DT0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116112 for 1566 contacts (-74.1/contact) +
2D Compatibility (PS) -19886 + (NN) -2773 + (LL) 252
1D Compatibility (HY) -18800 + (ID) 4700
Total energy: -162019.0 ( -103.46 by residue)
QMean score : 0.675
(partial model without unconserved sides chains):
PDB file :
Tito_1DT0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DT0-query.scw
PDB file :
Tito_Scwrl_1DT0.pdb
: