Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNIVIVGLQWGDEGKGKIVDYLSENADTVVRFQGGNNAGHTIVVDDEVYKLNLLPSAVLRTGKISIIGNGVALDPYALISEIESLRVKGMDINPNNLMVSESCPLILSVHKEKEKLFEDLNGNHKIGTTNKGIGPCYEDKVGRRAIRLCDLENADELNKRLDTLLNYHN-AIRKGLSYRVIKKEEMLREIEEIAEKIIPYRKPVWKILNDFVKEGKKIIFEGAQGTFLDIDHGTYPFVTSSNTIASQVMTGSGLSSN--AYVIGVAKAYTTRVGNGPFPTEQRNEVGNSLFTIGKELGTVSNRKRRCGWFDAVLVRQAVQLSGVSSIILTKLDVLDSFDKIKICTGYQY-SGKIYDYLPASRSIQEELEPIYEEFPGWKENTQGEKLAEKLPVNLIKYVKRVEELIGIPIHLISAGPKREDVIKLKDFKFSESVLVSY |
| 1SOO Chain:A ((2-427)) | -NNVVVLGTQWGDEGKGKIVDLLTERAKYVVRYQGGHNAGHTLVINGEKTVLHLIPSGILRENVTSIIGNGVVLSPAALMKEMKELEDRGIPVR-ERLLLSEACPLILDYHVALDNAREKARGAKAIGTTGRGIGPAYEDKVARRGLRVGDLFDKETFAEKLKEVMEYHNFQLVNYYKAEAVDYQKVLDDTMAVADILTSMVVDVSDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDYVLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQLNSLSGFCLTKLDVLDGLKEVKLCVAYRMPDGREVTTTPLAADDWKGVEPIYETMPGWSESTFGVKDRSGLPQAALNYIKRIEELTGVPIDIISTGPDRTETMILRDPFDA------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SOO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182985 for 3735 contacts (-49.0/contact) +
2D Compatibility (PS) -45813 + (NN) -18177 + (LL) 636
1D Compatibility (HY) -34000 + (ID) 9900
Total energy: -290239.0 ( -77.71 by residue)
QMean score : 0.523
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