Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNINIFVFLALSFVTSFNSIQAQILYTWSQVIPDNKLSVRAIIDSNTCPVAYVDGKGVEMLNRSSINNGDHTETICEMIVETGAQNISIDGIQVPILPEKISRIAFIGDTGCRINALFQQECNSVDSWPFKKNLDSIAL--HEPDLIVHVGDYHYRKTKCRNAQKCGNIYGYNKEAWYADWFEPAKDIL--LQSSFLFVRGNHENCDRAYEGWFRYLDSHPFSSEKCENFVPGWFLDIGPMKFFIFDSSSGEDIFTTQSTIDAFEKQFDKLT--QDS-SDKPTWFLTHRPLWRSPKKEFLTLKSHGNLTQIEAFGDKFPNNVATIVSGHIHIAQILLMNNVPDQIIVGNGGALLHAQDQEPVYQNIEFSYSNGKNYLAHEIKNFFGFGFSILNLDNH--EFTFYDQN-NEEMYSAKLTEDFKLEIN |
| 3IB7 Chain:A ((23-287)) | --------------------------------------------------------------------------------------------------RPDYVLLHISDTHLIGGDRRLYGAV-DADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEP------------AAYRKL----RGLVEPFAAQLGAELVWVMGNHDDRAE----LRKFLLDE-A----PSMAPLDRVCMIDGLRIIVLDTSVPGH-----HHGEIRASQLGWLAEELATPAPDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLR---GTDVRAILAGHLHYSTNATFV-GIPVSVASATCYTQDLTV----AA-----------GG--TRGRDGAQGCNLVHVYPDTVVHSVIPLGGGETVGTFVSPGQARRKIA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IB7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108570 for 2119 contacts (-51.2/contact) +
2D Compatibility (PS) -27372 + (NN) -11302 + (LL) 8844
1D Compatibility (HY) -1200 + (ID) 1650
Total energy: -141250.0 ( -66.66 by residue)
QMean score : 0.415
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