Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYYDDGIPVFDSLDKLTKPNSMKVVSSDSSEKGDIVLEPLESGFALTLGNALRRVMLSSLIGSAVYGIKIDGITHEFTSIQGVREDVTDIVLNMGMLRCKLNGTSNKCLSLSAKGPCQVLAGMIETDDQCSIVNKDLLICTLG-QDVELNMTIYVASGKGYLPV-TKYKENEFLKPMNEQDLISFIPVNALYSPINRVSYRVENSRVGQVTDKDKLILSVETDGTISPSQAVDSAARILQEQLQPFISSDISYKKSQVSSPSGYKDLGYDPILLRKVDEMELSVRSHNCLKNENITYIGDLVQKTESEMLRTANFGRKSLNEIKAVLNNFGLSLGMDIPDWPPKDIDELARQHTDED |
| 4S20 Chain:A ((20-232)) | ----------------------------SSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIHSEEDERP------IGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFV-------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4S20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127853 for 1475 contacts (-86.7/contact) +
2D Compatibility (PS) -22121 + (NN) -5948 + (LL) 7036
1D Compatibility (HY) -18800 + (ID) 4600
Total energy: -172286.0 ( -116.80 by residue)
QMean score : 0.467
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