Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFKELYRDSIVKSLKDKFNYGNIMQVPKLVKVCINMGVGGAATDNKAINEPFDDLYLIAGQKPVSTFAKKSISGFKIRKGATVGCKVTLRRDKMYEFLERLIYVALPREKDFRGFSVKQFDGNGNFSFGIKEHISFLEIDYDKISKIRGMDINIVTSAASDKEAKELLLAFKFPFFD
3BBX Chain:F ((3-176))
-LHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLDNAAADLAAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDEEGRALLAAFDFPFRK
General information:
TITO was launched using:
RESULT:
Template:
3BBX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90338 for 1187 contacts (-76.1/contact) +
2D Compatibility (PS) -18042 + (NN) -5568 + (LL) 208
1D Compatibility (HY) -17600 + (ID) 4700
Total energy: -136040.0 ( -114.61 by residue)
QMean score : 0.326
(partial model without unconserved sides chains):
PDB file :
Tito_3BBX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BBX-query.scw
PDB file :
Tito_Scwrl_3BBX.pdb
: