Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQKNTLLEVADNSGAREVLCIGLLGG--RKSASIGDTIVVSTKSVNPKGKVEKGKVYRAVVVRVKNCIRKSDNSVIRFSSNAVVLVNNQGE-PLGTRVFGPV-KKLPSGSFMKIMSLAVEVL
2J28 Chain:K ((1-121))
-IQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGPVTRELRSEKFMKIISLAPEV-
General information:
TITO was launched using:
RESULT:
Template:
2J28.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68624 for 871 contacts (-78.8/contact) +
2D Compatibility (PS) -13397 + (NN) -9112 + (LL) 384
1D Compatibility (HY) -13200 + (ID) 3500
Total energy: -107449.0 ( -123.36 by residue)
QMean score : 0.441
(partial model without unconserved sides chains):
PDB file :
Tito_2J28.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J28-query.scw
PDB file :
Tito_Scwrl_2J28.pdb
: