Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSEKIELIFEKLKQSNPIPKIELSYTNHFTLLVAIVLSARTTDVSVNKITKELFSIANTPEKMLNLGQSELKKHISSIGLYNSKAKNIIELSRILVERHTSKVPTNFDDLVSLPGVGRKSANVFLNSGLGIPTLAVDTHVFRVSNKIGLVKEKDVFK--TEKSLLNVVPKKYLLYA-----HHWLVLHGRYVCKAQKPSCKTCIIHDLCEFECKRYKV
3FSP Chain:A ((38-218))
---------------------------DPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLEALADADEDEVLKAWEGLGYY-SRVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVDGNVMRVLSRLFLVTD-DIAKPSTRKRFEQIV-REIMAYENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVAE
General information:
TITO was launched using:
RESULT:
Template:
3FSP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95688 for 1306 contacts (-73.3/contact) +
2D Compatibility (PS) -18053 + (NN) -8863 + (LL) 1944
1D Compatibility (HY) -12400 + (ID) 2350
Total energy: -135410.0 ( -103.68 by residue)
QMean score : 0.437
(partial model without unconserved sides chains):
PDB file :
Tito_3FSP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FSP-query.scw
PDB file :
Tito_Scwrl_3FSP.pdb
: