Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKDPVLNAVTFLMVPLIILFALYIQFHGDYTPGGGFQAGIIIASGIILYSMLFGVSTTLKAIPYSAIKFTSMLGI-FIYGGTGIATVLLGQNFLSYDILLANNVAGQKLGIFLVELGVALTVCSSMLIIYIDFARRKK
2I4Q Chain:A ((86-149))
-----------------------------------GFLSQDIITVGGITVTQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIF-DNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHY
General information:
TITO was launched using:
RESULT:
Template:
2I4Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47820 for 324 contacts (-147.6/contact) +
2D Compatibility (PS) -6394 + (NN) 806 + (LL) 2548
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -56660.0 ( -174.88 by residue)
QMean score : -0.175
(partial model without unconserved sides chains):
PDB file :
Tito_2I4Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I4Q-query.scw
PDB file :
Tito_Scwrl_2I4Q.pdb
: