Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKFLLKPKKSLGQNFILSSEITKRIVVLAGNLEDFNVIEIGPGYGALTKEILAHNPKSLLAIEKDSNLVKCHDQLLNEHQGKFRIVEADALYVVEEELIERPVKVIANLPYNISLALFLKWLNKIKLFTTFTLMFQKEVADRIIARPNSKDYGSLSVLSQLLCDIRREFDIEPKEFFPRPKVYSSVITVKPLPTQRFAVNLEALTKLTRAVFAQRRKMLRNSLQNVT---NRTETALENAKLSGNERPKNLTVEQFCLLANNM
3FUW Chain:A ((23-267))
---------KRFGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAG-AEVTAIEKDLRLRPVLEETLSGL--PVRLVFQDALLYPWEEVPQGSL-LVANLPYHIATPLVTRLL-KTGRFARLVFLVQKEVAERMTARPKTPAYGVLTLRVAHHAVAERLFDLPPGAFFPPPKVWSSLVRLTPT----GALDDPGLFRLVEAAFGKRRKTLLNALAAAGYPKARVEEALRALGLPPRVRAEELDLEAFRRLREGL
General information:
TITO was launched using:
RESULT:
Template:
3FUW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165717 for 1967 contacts (-84.2/contact) +
2D Compatibility (PS) -26004 + (NN) -10705 + (LL) 864
1D Compatibility (HY) -16800 + (ID) 4500
Total energy: -222862.0 ( -113.30 by residue)
QMean score : 0.488
(partial model without unconserved sides chains):
PDB file :
Tito_3FUW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FUW-query.scw
PDB file :
Tito_Scwrl_3FUW.pdb
: