Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLIPKVSLCINGSTNLTQYITEVRKFPMLSQEEEVRLAKSWNQCKDISSAHKLITSHLNLVVKIAMKFKNYGLLLMDLIMEGNMGLIHAVKKFNPDLGFRFSTYAVWWIEASIKDFILKSWSFVKIGTTQAQRRLFFSLRKIKKRILQYTNRETLNNEEIKAISNELSVSEGDVIQMNYRLACKDQSLNNCIKVGGDSKKELQDMIPCNSVNQEVTYQNREEKELKETILNNALASLNERSRDIFISRY-LSENTQ-TLDELSKKYCVSRERIRQLAEQAMSKVKQHIQSESLKFSLHA |
4YLO Chain:F ((381-623)) | ---------------------------------------SIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIE--TINKLNRISRQMLQEMGREPTPEE----LAERMLMPE-DKIRKVLKIAKEPISMETPI--GDDEDSHLGDFIEDTTL--ELPLDSATTESLR-AATHDVLAGLTAREAKVLRMRFGIDMNTDYTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YLO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65487 for 1358 contacts (-48.2/contact) +
2D Compatibility (PS) -25697 + (NN) -11673 + (LL) 4360
1D Compatibility (HY) -15200 + (ID) 3900
Total energy: -117597.0 ( -86.60 by residue)
QMean score : 0.505
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