Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQLLTKFFNLSSSKVELGIEVDHATVPWKGWLNGGQINLLLDMVDHQLGVLLGLEVGSY
1DJL Chain:A ((74-100))
----------------EQGKKVRFGIHPVAGRMP-GQLNVLLAEAGVPYDIVLEMDEINH
General information:
TITO was launched using:
RESULT:
Template:
1DJL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -663 for 100 contacts (-6.6/contact) +
2D Compatibility (PS) -2843 + (NN) -79 + (LL) 1360
1D Compatibility (HY) -800 + (ID) 500
Total energy: -3525.0 ( -35.25 by residue)
QMean score : 0.145
(partial model without unconserved sides chains):
PDB file :
Tito_1DJL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DJL-query.scw
PDB file :
Tito_Scwrl_1DJL.pdb
: