Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVLVGKDTRLICQGFTGAQGTFHSEQAISYGTKMVGGVTPGKGGSSHLNLPVFNTVAEAKEKTDANATVIYVPAKFAAAAILEAIDAEIELIVCITEGIPILDMVRVKHALISS-KSRLIGPNCPGIITPEECKIGIMPGHIHKRGHIGIMSRSGTLTYEAVAQTTAVGPGQSTCIGIGGDPIHGMTFVDCMELFLKDEDTHGIVVIGEIGGNEEEDVSHFVKTEKT---KKPIVGFIAGQTAPPGRRMGHAGAIISSSGGSAGAKLEVMSSAGIAIAETPAMIGKKILEVMHKAHVA |
| 1EUC Chain:A ((15-307)) | --LYVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKTHLGLPVFNTVKEAKEQTGATASVIYVPPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGKTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCVGIGGDPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKSKPVVSFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKITALQSAGVVVSMSPAQLGTTIYKEFEKRKML |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EUC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207028 for 2712 contacts (-76.3/contact) +
2D Compatibility (PS) -32427 + (NN) -23184 + (LL) 180
1D Compatibility (HY) -30000 + (ID) 9500
Total energy: -301959.0 ( -111.34 by residue)
QMean score : 0.606
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