Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLNTGLTNNDILDDIVSSDLSAMKNFIFRDVNNGDVKLAADIISHLVRSG--GKKVRPKLVFIICKMLNYSGEDRVK---VAASVEFIHNATLLHDDVLDESEARHGVKTANKIWGNKSSILVGDLLLTLAFRWLIECGNLNILSILSGASHSLVNGEIKQMAA----RFN-SHTIRKNYFDIIGKKTASLFSACCEAASVISNATSNETERLKNFGLNFGMAFQIIDDTLDYTADQRTSGKQVGKDFFEGKVTLPAIIAYEKGSPAEQKFWEKCFSLAERNFDQALHYINHHNAIQLSIEKARHYVNMAQNNINTFSDSS------YKIALIDFLNASIERQA |
| 3APZ Chain:A ((13-346)) | --------------LVADELSLLSNKL-REMVLAEVP------------GVQGKQFRSTILLLMATALDVTSELRVRQRGIAEITEMIHVASLLHDD----------------VMGNKMSVLAGDFLLSRACGALAALKNTEVVALLATAVEHLVTGETMEITSSTEQRYSMDYYMQKTYY-----KTASLISNSCKAVAVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVITAPILFAMEE-FPQLREVVDQVEK-DPRNVDIALEYLGKSKGIQRARELAMEHANLAAAAIGSLPETDNEDVKRSRRALIDLTHRVITRNK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3APZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148824 for 2151 contacts (-69.2/contact) +
2D Compatibility (PS) -29171 + (NN) -11289 + (LL) 3040
1D Compatibility (HY) -20400 + (ID) 4750
Total energy: -211394.0 ( -98.28 by residue)
QMean score : 0.438
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