Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGVVFSGTQPSGVLHLGNYLGAIKQWVTLQDKYKSIFCIVDLYAITANKLSASELKSNIFKTAAAYIACGIDPEKSIIFNQSTISSHTELSWLLGCYTPVGWLNRMTQFKDKAGSDKQKASLGLYSYPVLMAADILLYRTKYVPVGDDQKQHLELARDIALAFNNHYKLGH--FVIPEILVLDHASRIMSLRDGTSKMSKSPPSEYSCINLDDTDDLIVKKVGKAKTDSILGFDFA-TLKCRPEISNLINIYSVLSNLDVDKVCEEMNKYDM-QHFKGELADLIISVISPIREEINDLLKDQSHLYRVLKKGTEKAAEIVGHNIKEIKNIIGFVQ |
| 3SZ3 Chain:A ((8-338)) | ---IVLSGVQPSGELSIGNYLGALRQWQQMQDDYDCQYCVVDLHAITVRQ-DPQALHEATLDALAICLAVGVDPKKSTLFVQSHVPEHAQLGWVLNCYTQMGELSRMTQFKDKSARYANDVNAGLFGYPVLMAADILLYGAHQVPVGSDQKQHLELARDIATRFNNIYSPEQPIFTIPEPYIPTVNARVMSLQDATKKMSKSDDNRKNVITLLEDPKSIIKKINKAQTDAETPPRIAYDVENKAGIANLMGLYSAATGKTFAEIEAQYAGVEMYGPFKKDVGEAVVAMLEPVQAEYQRIRNDREYLNSVMRDGAEKASAKALQTLKKVYAAVGFVA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SZ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -202524 for 2610 contacts (-77.6/contact) +
2D Compatibility (PS) -34242 + (NN) -11768 + (LL) 264
1D Compatibility (HY) -26400 + (ID) 6750
Total energy: -281420.0 ( -107.82 by residue)
QMean score : 0.489
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