Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKFVRLLSSILVALSVIFLGYCYFTKKGIFAPAVIHNAEVKIGGDFSLINQDGQVIRSNDFKDKYMMIFFGFSSCKKICPMNLGIISETLAKLDEKTSDKLQTFFITVDPECDSTEKLKEFQQQFDY---RIQMLTG-ERKKIDE-VIANYKVYTSKVGGEEGINHSSIIYLIGPGGKYVTHFAADLNSDESQSDKIAAEIKKYINEL
1ON4 Chain:A ((16-152))
----------------------------------------------FTFQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENID-VRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSASTLK---
General information:
TITO was launched using:
RESULT:
Template:
1ON4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66303 for 935 contacts (-70.9/contact) +
2D Compatibility (PS) -14708 + (NN) -9781 + (LL) 4380
1D Compatibility (HY) -9200 + (ID) 2000
Total energy: -97612.0 ( -104.40 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_1ON4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ON4-query.scw
PDB file :
Tito_Scwrl_1ON4.pdb
: