Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADLEKMIEEFTKLRDQISYHDVLYHQKSKPEIADAEYDKLKQKLVEMEGQLPGACVTQDG----VGAAPDEKFSKIKHREPMLSLENAYDEQGVERFLSRI--KRFLIEEEIEVFCEPKIDGLSFSAVYEDGRFVKAATRGDGFIGEDVTRNVATIKGFPRFLQDVQD----RLEVRGEIYINNSDFLKLNK------DNEFANPRNAAAGSLKQLDVSITANRPLKYFAYSLIGGKE-----KSQSEVLNRLESLGFCVNEHRSLTNNLSGMLEFYNKVYNCRYSLDYDIDGIVYKVNDLILQSRLGSTHKAPRSALAYKFSAVYAKTKLNKIFIQVGRTGVLTPVADLIPVNIGGVLVSRANLHNQDEIKRKDVREGDIVTIKRAGDVIPQIVRVDKGSRHADAPGFVFPEICPECGGKVQAEGAAIRCSEELTCKAQIIGKLSHFVSKGAFDIFGLGEKQIKFFYDLGLIKQIPDIFNLEERLNEFSLKEQPDWGERSIANLLNAIQNRRVITLDRFIFSLGIRFIGQVAAELLANYYVSYNNWYNSMIKLLSNDAEVGVGGVEKKIAKSFSDELVGIDGIGEKVAESLKSFFSKEHNIKMLKDLTDYLQILSVNSNSSNSVLNNKVIVFTGKLLTMSRGEAKVRAKALGAKVSSNLSAKIDYLVAGEKPGNKYKKAVELGVGILNEDQWYRMINSEVSE |
| 3PN1 Chain:A ((1-318)) | MTNIQTQLDNLRKTLRQYEYE---YHVLDNPSVPDSEYDRLFHQLKALELEHP-EFLTSDSPTQRVGAKPLSGFSQIRHEIPMLSLDNAFSDAEFNAFVKRIEDRLILLPKPLTFCCEPKLDGLAVSILYVNGELTQAATRGDGTTGEDITANIRTIRNVP--LQLLTDNPPARLEVRGEVFMPHAGFERLNKYALEHNEKTFANPRNAAAGSLRQLDPNITSKRPLVLNAYG-IGIAEGVDLPTTHYARLQWLKSIGIPVNPEIRLCNGADEVLGFYRDIQNKRSSLGYDIDGTVLKINDIALQNELGFISKAPRWAIAYKFPA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PN1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68989 for 2264 contacts (-30.5/contact) +
2D Compatibility (PS) -31160 + (NN) -13458 + (LL) 26172
1D Compatibility (HY) -25600 + (ID) 6900
Total energy: -119935.0 ( -52.97 by residue)
QMean score : 0.391
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