Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYVVIINIVLLKVLMVLTITILSGGFSRERKISLMSGKAVKKALDSLSYNAIEIDVNS--NTAEKLKKINPDLAFIALHGPYGEDGCIQGLLEILGIKYTHSGVMASAIAMNKAMSKHIFRSLGIDTPKGYIISRGDILKNN--IKIDYPYVLKPINEGSSIGVHITFSHEDYLK-LKNMFSVIPVHDAGIEEEEPVWITRDLMIIEEYIPGIELHTAVLLDEAAGTMEIRPKNKFYDYKAKYTNGFA-EHIFPAEIPDNIYEMTLEHALKVHRFLGCKTISRSDFRYNPKDNTLKMLEINTHPGFTELSLVPEIAKLTKGIDFNELVKIIIEDSLQHKKILEIK |
| 3R5X Chain:A ((6-303)) | ------------------IGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLNEKMDLIEKAKDI--DFALLALHGKYGEDGTVQGTLESLGIPYSGSNMLSSGICMDKNISKKILRYEGIETPDWIELTKMEDLNFDELDKLGFPLVVKPNS----VGVKIVYDKDELISMLETVFE---------------WDSE--VVIEKYIKGEEITCSIFDGKQLPIISIRHAAEFFDYNAKYDDASTIEEVI--ELPAELKERVNKASLACYKALKCSVYARVDMMV--KDGIPYVMEVNTLPGMTQASLLPKSAD-AAGIHYSKLLDMIIETSLRVRKEEG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R5X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151379 for 2283 contacts (-66.3/contact) +
2D Compatibility (PS) -31448 + (NN) -11698 + (LL) 3976
1D Compatibility (HY) -27200 + (ID) 5250
Total energy: -222999.0 ( -97.68 by residue)
QMean score : 0.404
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