Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKESSKTKLSEDYTPSEDEEYMSVR--------QLEYFNLKLESILAELEKQELEDSAYYFDE-DSGNEKLIKRRKDR----KEKIKEALEKIKLGTYGYCDRTGEE------IGIARLKANPLA-VYCIEEQERLEKEKNVYKTDD
2R6M Chain:A ((26-137))
-----------------DEDYIQDKFNLTGLNEQVPHYRQALDMILDLE----------QSDLIEQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYCPRVYCENQPMLPIGLSDIPGEAMVKLYCPKCMDVYTPKSSRHHHTD
General information:
TITO was launched using:
RESULT:
Template:
2R6M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 14788 for 386 contacts (38.3/contact) +
2D Compatibility (PS) -8494 + (NN) -3259 + (LL) 1560
1D Compatibility (HY) -6000 + (ID) 1250
Total energy: -2655.0 ( -6.88 by residue)
QMean score : 0.311
(partial model without unconserved sides chains):
PDB file :
Tito_2R6M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R6M-query.scw
PDB file :
Tito_Scwrl_2R6M.pdb
: