Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVENE-GVLLVLSSPSGAGKTTILERLLER-STNLVRSVSMTTRKPRPGEINGKDYFFVTKKEFHELCEAGQMLEYARVFENFYGIPKSFIEQNLSSGISVLLSIDWQGAFHLFELMREKVISVFILPPSMEELRLRLQKRNSDSASEIEHRLAEAQKEMSKRDKYDYVVINDDIDKSVEEISSILDKERLKRSGV
2J41 Chain:A ((4-194))
-----EKGLLIVLSGPSGVGKGTVRKRIFEDPSTSYKYSISMTTRQMREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVGNYYGTPVQYVKDTMDEGHDVFLEIEVEGAKQVRKKFPDALF-IFLAPPS---------------------------KEVEMMNLYDYVVVNDEVELAKNRIQCIVEAEHLKRERV
General information:
TITO was launched using:
RESULT:
Template:
2J41.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101718 for 1187 contacts (-85.7/contact) +
2D Compatibility (PS) -17931 + (NN) -8465 + (LL) 3116
1D Compatibility (HY) -16800 + (ID) 3350
Total energy: -145148.0 ( -122.28 by residue)
QMean score : 0.579
(partial model without unconserved sides chains):
PDB file :
Tito_2J41.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J41-query.scw
PDB file :
Tito_Scwrl_2J41.pdb
: