Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKSFILSTGSYLPKKKLGNDEIALMVETSDEWIRQRTGITQRYIADEAELTSDLAVNSAKNAIEKAQISVDEIGLIIVATTTPDKTLPSCATIAQNKLKCKNAFSFDVQAACSGFIYAVTIADSLIKSNDRIKYALVIGAEIMSRIVDWKDRSTCVLFGDGAGAVIMKSTAHCNEMTENSTRGIISTNLYSDG---NVDVLCT-KGGISSTGDSGKIYMNGREVFKHAVDKLTASIEETLRCNNLKITDIDWLVPHQANIRIIEAVVKKLNFLMEKVINTVDQHANTSAASIPLALDYAIQKPKIKPGSLGILVAIGAGLTWGSVLLRY |
3IL3 Chain:A ((1-316)) | MN-SRILSTGSYLPSHIRTNADLEKMVDTSDEWIVTRSGIRERRIAAEDETVATMGFEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNIDDAISFDLAAA-TGFVYALSVADQFIRAG-KVKKALVIGSDLNSRKLDETDRSTVVLFGDGAGAVILEASEQ---------EGIISTHLHASADKNNALVLAQPERGIEK---SGYIEMQGNETFKLAVRELSNVVEETLLANNLDKKDLDWLVPHQANLRIITATAKKLEMDMSQVVVTLDKYANNSAATVPVALDEAIRDGRIQRGQLLLLEAFGGGWTWGSALVRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IL3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -268417 for 2914 contacts (-92.1/contact) +
2D Compatibility (PS) -32441 + (NN) -7853 + (LL) 236
1D Compatibility (HY) -25200 + (ID) 8100
Total energy: -341775.0 ( -117.29 by residue)
QMean score : 0.489
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