Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYIQILPETFSIISSLVLLLLGIVFNRRTINLLALGCTVITLIILILSAKDSGFFPFNSLLKLDLYIRSAQGLILIAGILVLLLLNLSKYDYEYEFSILILFTLFGMITLVSANNLISFYLSFELMSIPLYVLASFNKDSVYSCEAGVKYFTLSALSSCIMLYGMSLLYGYTGLVNFSELSSFLENHQMTYGIVFGLVLILIGLCFKLAIAPFHMWAPDVYQGAPTIVTAFFSTVPKAALVTFLIRFFMGEELVGVEKYFQPVLLYISALSVLISAFGALRQRNLKRLLAYSSIGHIGFILASLSIFTRMGTDSSLIYLVIYIITNIGLFSYFIQIDDDDCSVANLSGIGKKRPVLAFHLSILLFSMAGIPPLAGFFAKLFIFKSLVNSGFIGMSLIFIVASVISCYYYLSIIKAMYFDKPSDSKVIYSKSLFIVTSVASLINIVLFMCVEDLYSLIHLVTKSL |
| 3OBQ Chain:A ((69-91)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YNIPICLWLLDTYPYNPPICFVKPTSSMTIKTGKHVDANGKIYLPYLHEWKHPQSDLLGLIQVMIVVFGDEPPVFSRP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OBQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5970 for 87 contacts (-68.6/contact) +
2D Compatibility (PS) -2391 + (NN) 1313 + (LL) 33848
1D Compatibility (HY) -1200 + (ID) 300
Total energy: 25300.0 ( 290.80 by residue)
QMean score : 0.079
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