Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFVNGGQLKKINQKWLIIGTGLLLFMMMLPSIILLAKMTIGLVMVLVVAIAIKIASKTISNVLEDKQADPNQLTSQTTQSRIINLAVGLVSIFTGGLSLLIIAKTGIAVICAAVVTLAIYEYAKDYKYAEDK--EIGKSINDKLDEIAKNTTNFIVSGIEKLVSPQEQQV |
1RTW Chain:A ((72-111)) | ---------------------------------------------------------------------------------------------------------------------SIYYISKELEMFEKKAQELGISLNGEIDWRAKSYVNYLLSVASLGSFLEGFTA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RTW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3062 for 127 contacts (24.1/contact) +
2D Compatibility (PS) -4007 + (NN) -744 + (LL) 11372
1D Compatibility (HY) -4000 + (ID) 700
Total energy: 4983.0 ( 39.24 by residue)
QMean score : 0.287
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