Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSPEFAINALNSLLKSKNEVVAVYTKAPKPSGRGQKLTKSPVHIIAEESGIEV-------CTPTSLKPLVEQEKFKKFKPDVAVVAAYGLILPKEILNILKYSCINIHPSLLPRWRGAAPIQHTILAGDRKTGISIMQLDGGLDSGPILKQKKFLVEKNDNYKTLHDK-LSKLGSNLLMEVIDEIE--KHPPLEQSDDGACYA--DKIEDYKIYASDICEVAYRKVKA--FYPKAFVKIEHKRVRILDAD-FEVDASLTSGQGKIINDNMHISLKSGTLIPKIVQMEGRNSCNIKDFVRGLKFSMVKKFIE |
| 4QPD Chain:A ((6-260)) | IGQSLFGQEVYKELKNEGHMIVGVFT-IPDKDGK-----VDPLAIEAEKDGVPVFKFPRWRLKGKAITEVVDQ--YKAVGAELNVLPFCSQFIPMEVIDHPKHGSIIYHPSLLPRHRGASAINWTLIHGDKKGGFTVFWADDGLDTGPILLQRECDVEPNDNVNSIYKRFLFPEGVKGMVEAVRLIATGKAPRIKQPEEGATYECIQKKENSKIDWNQPAEAIHNWIRGNDRVPGAWAEIDGKSVSFYGSTLLENDHFSSNGQPLEIPGASRAALVTKNGLVLFGNDGKMLLVKNLQFEDGKMIPGSQYFK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QPD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101649 for 1750 contacts (-58.1/contact) +
2D Compatibility (PS) -26120 + (NN) -11631 + (LL) 300
1D Compatibility (HY) -13200 + (ID) 3800
Total energy: -156100.0 ( -89.20 by residue)
QMean score : 0.436
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