Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKWLDIENIAEAL-----------EEKFPGEDIVNIRFTKLKEKVLNLEGFSDDEKRCNEKILEAIQAAWIEERS
2NML Chain:A ((18-68))
-TYADYESVNECMEGVCKMYEEHLKRMNPNSPSITYDISQLFDFIDDLADLSCLVYRADTQTYQPYNKDWIKEKI
General information:
TITO was launched using:
RESULT:
Template:
2NML.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1045 for 136 contacts (-7.7/contact) +
2D Compatibility (PS) -4743 + (NN) -4613 + (LL) 208
1D Compatibility (HY) -2800 + (ID) 350
Total energy: -13343.0 ( -98.11 by residue)
QMean score : 0.478
(partial model without unconserved sides chains):
PDB file :
Tito_2NML.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2NML-query.scw
PDB file :
Tito_Scwrl_2NML.pdb
: