Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNFEQIKKDITENDVVLYMKGTSDFPQCGFSGLVVSILKKLNVKFKYINVLENDEIRQSIKKFSNWPTIPQLYIKGEFIGGCDITREIYEKGELQSLLKEKKIVE
3ZYW Chain:A ((8-100))
-----RLKKLTHAAPCMLFMKGTPQEPRCGFSKQMVEILHKHNIQFSSFDIFSDEEVRQGLKAYSSWPTYPQLYVSGELIGGLDIIKELEASEELDTICPKAAENL
General information:
TITO was launched using:
RESULT:
Template:
3ZYW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73285 for 663 contacts (-110.5/contact) +
2D Compatibility (PS) -10156 + (NN) -4169 + (LL) 336
1D Compatibility (HY) -10400 + (ID) 2000
Total energy: -99674.0 ( -150.34 by residue)
QMean score : 0.651
(partial model without unconserved sides chains):
PDB file :
Tito_3ZYW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZYW-query.scw
PDB file :
Tito_Scwrl_3ZYW.pdb
: