Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRTFQPKNLIRKRRHGFRSRMATRAGRKILNRRRSLGCKKLCA
3CJK Chain:B ((60-75))
------------IDDMGFDAVIHNIEGR----------------
General information:
TITO was launched using:
RESULT:
Template:
3CJK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1658 for 42 contacts (39.5/contact) +
2D Compatibility (PS) -1640 + (NN) 148 + (LL) 2200
1D Compatibility (HY) -800 + (ID) 200
Total energy: 1366.0 ( 32.52 by residue)
QMean score : 0.208
(partial model without unconserved sides chains):
PDB file :
Tito_3CJK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CJK-query.scw
PDB file :
Tito_Scwrl_3CJK.pdb
: