Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKAVVLLNLGGPDSLSAVRPFLFNLFYDKRIINLPNPFRFFLAKFISAKRENNARKIYEQIGGKSPILENTKMQAEALERELNRSVFCHPSSVTLGPRKENWIPVSRIGMTSKLTKVFICMRYWHPFANEVVKSVKQFDPDEVILLPLYPQYSTTTTLSSIENWQKNAKQYGIKCNTK--IIRHHYDNQDFIEAHANLITK---HYKLA--SEVGKPRVLFSAHSLPLSVIKKGDPYALQVEETVKLIVKKLHIKDLDWSICYQSKIGPVKWLEPSTESELLRAKADGVP-VVLLPISFVSEHSETLVELDMEYKTIIKDGYYF----RIPTLSTNSLFIKCLAGLCINHS |
4KLR Chain:A ((15-335)) | -KTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLP--IQNKLAPFIAKRRTPKIQEQYRRIGGGSPIKIWTSKQGEGMVKLLDE----------LSP---NTAP----------HKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHILKELDHFPLEKRSEV---VILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCN-PYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIQTLYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADLVHSHI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KLR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164620 for 2488 contacts (-66.2/contact) +
2D Compatibility (PS) -34015 + (NN) -23105 + (LL) 1396
1D Compatibility (HY) -25600 + (ID) 5850
Total energy: -251794.0 ( -101.20 by residue)
QMean score : 0.525
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