Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKKALLELSNGLKIELPVLSGTMGYDVLNIKDLYKVTGLLTYDPGFVSTASCSSAITFIDGDEGVLRYRGHDIADLAQSNDFTAVIYLLLYGKLPNLEQHKKFFLKIQELSKVPEQVVNVIKAFPKTAHPMSILIACFATLSALYHERYGNNVSNENLDFGISAIAQVPAIIAMVYRHTNDQEFIDTDNELNYSKSFLRMMFGNALDN-DKSTLFAKALDKIFTLHADHEQNASTAAVRVVGSAGSNLFACLSAGVATLWGPVHGGANESVINMLKEIEQSGNVDKFIEKAKDDKDPFKLMGFGHRVYKNYDPRARILKDACDEILNKLEQDSKLLKIAKELEKIALKDEYFVVRKLYPNVDFYSGIIMNAINIPPSMFTPIFALARTTGWVTQWYEMINDKETKICRPRQLYVGK |
1OWC Chain:A ((3-415)) | -DTKAKLTLNGDTAVELDVLKGTLGQDVIDIRTL-GSKGVFTFDPGFTSTASCESKITFIDGDEGILLHRGFPIDQLATDSNYLEVCYILLNGEKPTQEQYDEFKTTVTLHTMIHEQITRLFHAFRRDSHPMAVMCGITGALAAFYHDSLDVNNPRHREIAAFRLLSKMPTMAAMCYKYSIGQPFVYPRNDLSYAGNFLNMMFSTPCEPYEVNPILERAMDRILILHADHEQNASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKMLEEISSVKHIPEFFRRAKDKNDSFRLMGFGHRVYKNYDPRATVMRETCHEVLKELGTKDDLLEVAMELENIALNDPYFIEKKLYPNVDFYSGIILKAMGIPSSMFTVIFAMARTVGWIAHWSEMHSDG-MKIARPRQLYTGY |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1OWC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -231611 for 3326 contacts (-69.6/contact) +
2D Compatibility (PS) -43367 + (NN) -15368 + (LL) 404
1D Compatibility (HY) -39600 + (ID) 9800
Total energy: -339342.0 ( -102.03 by residue)
QMean score : 0.501
|
|
|