Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSELAKSTREDIEAKIKKIVLEHIS-KDVEKFNNSSKLSEHGADSLDAVEIIMAAEEEFGIEIPDEDAQKMETMEQIVEYVSNKKNNS
1T8K Chain:A ((3-76))
------------IEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGHQA--
General information:
TITO was launched using:
RESULT:
Template:
1T8K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12675 for 483 contacts (-26.2/contact) +
2D Compatibility (PS) -8101 + (NN) -4671 + (LL) 580
1D Compatibility (HY) -5200 + (ID) 1700
Total energy: -31767.0 ( -65.77 by residue)
QMean score : 0.637
(partial model without unconserved sides chains):
PDB file :
Tito_1T8K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T8K-query.scw
PDB file :
Tito_Scwrl_1T8K.pdb
: