Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFSNLYRGLLKTSSRFSDGVKSIFSAKKKLDQSLLDELEELLISMDIGHKTSKLIIDRLASIKFDKEVEHNIITQQLMS--EIEAILNPVVQPLILDKN-----------PHIIMVCGVNGNGKTTTIGKLAYKYKNMGKSVMLVACDTFRAAASEQLNIWAERSDCFIVTGEYGN-DSASVAYRAVSQAIKGSVDVVLIDTAGRLQNNVNLMEELSKIYRTIKKLDGTAPHDVILVLDATTGQNAYSQLEAFSKMVSVTGLIITKLDGTAKGGVVIGLAETYRVKLHAIGIGESIEDLREFTSKEFAKALFGCD |
| 3B9Q Chain:A ((32-301)) | ---------------------------------VLDELEEALLVSDFGPKITVRIVERL---------REDIMSGKLKSGSEIKDALKESVLEMLAK--SKTELQLGFRKPAVIMIVGVNGGGKTTSLGKLAHRLKNEGTKVLMAAGDTFRAAASDQLEIWAERTGCEIVVAE--KAKAATVLSKAVKRGKEEGYDVVLCDTSGRLHTNYSLMEELIACKKAVGKIVSGAPNEILLVLDGNTGLNMLPQAREFNEVVGITGLILTKLDGSARGGCVVSVVEELGIPVKFIGVGEAVEDLQPFDPEAFVNAIFS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B9Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233729 for 2127 contacts (-109.9/contact) +
2D Compatibility (PS) -27670 + (NN) -12095 + (LL) 2448
1D Compatibility (HY) -25600 + (ID) 5800
Total energy: -302446.0 ( -142.19 by residue)
QMean score : 0.536
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