Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYNEKILDHYENPRNVGSLDKNDPSVGTGLVGAPSCGDVMKLQIKVNDKGVIEDAKFKTFGCGSAIASSSLLTEMIKGKTIEDVTKIKN--TQIVEELSLP-----------------PVKVHCSVLAEDAIKAAIHDYQSKHSKNES
1SU0 Chain:B ((10-139))
--YMAVVADHSKRPHHHGQLD----GVEAVQLNNPTCGDVISLTVKF-DEDKIEDIAFAGNGCTISTASSSMMTDAVIGKSKEEALALADIFSEMVQGQENPAQKELGEAELLAGVAKFPQRIKCSTLAWNALKEAIKR----------
General information:
TITO was launched using:
RESULT:
Template:
1SU0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31858 for 822 contacts (-38.8/contact) +
2D Compatibility (PS) -11788 + (NN) -3276 + (LL) 84
1D Compatibility (HY) -4400 + (ID) 2050
Total energy: -53288.0 ( -64.83 by residue)
QMean score : 0.403
(partial model without unconserved sides chains):
PDB file :
Tito_1SU0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SU0-query.scw
PDB file :
Tito_Scwrl_1SU0.pdb
: