Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEYQGVNTVKKDRKPITITANAVERIRYLLDQKQYTNLERSEEAIGIRVLIKQKGCSGLKYDIEYAYDIHPLESVIEESCSDGQKVKVLIDPKSVMFILGSEMDYVEEKFSSGFVFKNPNEKGKCGCGESFHV
3ZQ4 Chain:A ((231-272))
-----------------------------------------------------------------FASNIHRLQQVIEAAVQNGRKVAVFGRSMESAIEIGQTLGYINCPKNTFIEHNEINRMPANKVTILCTG
General information:
TITO was launched using:
RESULT:
Template:
3ZQ4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21742 for 224 contacts (-97.1/contact) +
2D Compatibility (PS) -4351 + (NN) 987 + (LL) 5020
1D Compatibility (HY) -3600 + (ID) 650
Total energy: -24336.0 ( -108.64 by residue)
QMean score : 0.284
(partial model without unconserved sides chains):
PDB file :
Tito_3ZQ4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZQ4-query.scw
PDB file :
Tito_Scwrl_3ZQ4.pdb
: