Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPISLPKVRGIYRYSVLMSKITWLNVGGQADILFKPRDIEDLIYLIKNTKLPISVIGATSNMIVRD--------SGIRGITVKLGKEFAYIKYKSNNSIIAGGAALLSNLAYFAGEQQVSGLEFLVGIPGTIGGGIEMNAGAYGSDVASVVQSIKAVNLSDGNLYEFSSKEMGYVYRG----HSLKGQWIFIEAEFKGVSSGHEVI----LHRL-------KEIIN------KKNKSQPVRGKTAGCIFKNP---------------------------RAYQAWKLIDGSGCRGLNNGGAKISKKHCNFLLNYNNATASDLENLGNKVRNTVKDKFNIELEWEIRVLGSH |
2Q85 Chain:A ((42-331)) | ---------------------------------------------------PVLILGEGSNVLFLEDYRGTVIINRIKGIEIHDEPDAWYLH--------VGAGENWHRLVKYTLQEGMPGLENLALIPGCVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLTAKECRFGYRDSIFKHEYQDRFAIVAVGLRLPKEWQPVLTYGDLTRLDPTTVTPQQVFNAVCHMRTTKLPDPKVNGNAGSFFKNPVVSAETAKALLSQFPTAPNYPQADGSVKLAAGW-LIDQCQLKGMQIGGAAVHRQQALVLINEDNAKSEDVVQLAHHVRQKVGEKFNVWLEPEVRFIGAS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q85.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115907 for 1774 contacts (-65.3/contact) +
2D Compatibility (PS) -24906 + (NN) -4608 + (LL) 4312
1D Compatibility (HY) -18000 + (ID) 3450
Total energy: -162559.0 ( -91.63 by residue)
QMean score : 0.390
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