Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHDIDKQLQEQVNNLDRTEKSAAELERKIQEHKEEFMKKEKKQTTGRDKYRAYKKEQNSF
3VP9 Chain:A ((40-70))--DYDFKMNQQLAEMQQIRNTVYERELTHRKMKDAYEEEIKHLKLGLEQ-----------


General information:
TITO was launched using:
RESULT:

Template: 3VP9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3957 for 115 contacts (34.4/contact) +
2D Compatibility (PS) -3583 + (NN) -2859 + (LL) 1332
1D Compatibility (HY) -800 + (ID) 300
Total energy: -2253.0 ( -19.59 by residue)
QMean score : 0.682

(partial model without unconserved sides chains):
PDB file : Tito_3VP9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VP9-query.scw
PDB file : Tito_Scwrl_3VP9.pdb: