Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKTKLSLLLIAVFLLNIDFLLSCPVFADGVSGTDKTEFVSRF---SSAGSFSRA----SNP---DCGAFKTAAAIAGIAIAVGAVWTGIVLIFSSSGLFTALVIVGMIAAIVGVWKAIGGLVVCEHSFVRHPVARDHDGEYKDFALLDGGYADCTNKNYQKEDEYFSCLQNKTRKNANKEDYDRKRAEREALNPNVQNNTGNYYWPKNSVQYSEYIEVCHRNPLTFGNLFKKEDFDRRGEDKYINFDVREKDTGYVDGSWSPKVDGDLDCKVLKAGQSKTIHGSTFKALRKMGRLCVELASISTLGISMTPWPQGVDMGCTELPPDPLAPMCDESKMKFKNKGGIIITDPNPIKDLLKGNESKDYKTLIREREEKKEIFVGYDNKGCFSSYVSEACHNQAGSKSLAPIPITSMIVQCIKESLDNLVAGKGTPNGESFISVAQERLKNTITAVLVLALILFSIKAMSGGVHSPQEMYMLIIKFALVIYFTTGNTMSHYYGELTKLSNGLSEIVLKASSESKGICNYEAKDYKNDTTNYSYLAPWDRLDCRILFYLGAPLDGIAGKIGTGDVGILAILLGAAPALLVAGSVIGIICAGGQILVALVAIFMAIMMMMVILWMCYVFILSLIALSIIIILSPLFIPMVLFQHTKGYFDGWLRELITYSLYPVMLFAFLSFMFIACDKIYFKNLHFEKEEKIKILGNEKQWFKLKSGECDKNENTLACMMQNYKWEKSNILGLFDFTYMEFGNSLIGELLKLALILFLFYHFLNILPDMAAELSGNHRAALGSGATPGKMMSKAFSVAKAIAGAVGKAHSGDAAGAAKEAQKARDDSRALASGNADDKSGRSPATVGSEAANATGEAIRGTADAAQSAASEAANSTES |
| 1MW3 Chain:A ((408-458)) | -----------------------------GISGYDHRQFLNRFFVNRFDGSFARGVPFQYNPSTGDCRVSGTAAALVGLAQDDPHAVDRIKLLYSIALSTGGLPLIYLGDEVGTLNDDDWSQDSNKSDDSRWAHRPRYNEALYAQRNDPSTAAGQIYQDLRHMIAVRQSNPRFDGGRLVTFNTNNKHIIGYIRNNALLAFGNFSEYPQTVTAHTLQAMPFKAHDLIGGKTVSLNQDLTLQPYQVMWLEIA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MW3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 913 for 183 contacts (5.0/contact) +
2D Compatibility (PS) -4114 + (NN) 2009 + (LL) 45636
1D Compatibility (HY) -2800 + (ID) 1050
Total energy: 40594.0 ( 221.83 by residue)
QMean score : 0.299
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