Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKEIKTKTKERMLKTIQSFYNDIKGIRTGRASASLLDGIVVNIYGGHQKLNQVAGVSVTDNKTLLIKVWDIGVIGEVKNAILNANLNLNPVVEGNTIRIVLPDLTQETRERLVKLLHQFAENARVAIRNIRRDIMEEIERMQENKKISEDDFHNAKKEIQNITDDNIKKIDGELSIKEKDILNY
1DD5 Chain:A ((9-185))
--------AKEKMKRTLEKIEDELRKMRTGKPSPAILEEIKVDYYGVPTPVNQLATISISEERTLVIKPWDKSVLSLIEKAINASDLGLNPINDGNVIRLVFPSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKKIKEDQKEGLIPEDDAKRLENEIQKLTDEFIEKLDEVFEIKKEEIMEF
General information:
TITO was launched using:
RESULT:
Template:
1DD5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91224 for 1233 contacts (-74.0/contact) +
2D Compatibility (PS) -19698 + (NN) -6384 + (LL) 936
1D Compatibility (HY) -14800 + (ID) 3400
Total energy: -134570.0 ( -109.14 by residue)
QMean score : 0.635
(partial model without unconserved sides chains):
PDB file :
Tito_1DD5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DD5-query.scw
PDB file :
Tito_Scwrl_1DD5.pdb
: