Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKVIFTQDVKGKGKKGEVKEVPVGYANNFLLKKNYAVEATPGNLKQLELQKKRAKQERQQEIEDAKALKETLSNIE-VEVSAKTGEGGKLFGSVSTKQIAEALKAQHDIKIDKRKMDLPNGI-HSLGYTNVPVKLDKEVEGTIRVHTVEQ |
2J28 Chain:H ((1-149)) | MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEARRAELEAKLAEVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADAVTAA-GVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVVAE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J28.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 53597 for 756 contacts (70.9/contact) +
2D Compatibility (PS) -14239 + (NN) 7341 + (LL) 44
1D Compatibility (HY) 8000 + (ID) 700
Total energy: 54043.0 ( 71.49 by residue)
QMean score : 0.034
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