Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDIANMTIMLLIGVLGGFISGLIGIGGAIIIYPAILILPPLIGIPAYSAYIASGLTSSQVFFSTLSGSLNARKQPAFSPKLVIYMGGGMLIGSMLGAILA-SLFNATFVNTVYVIIAILALILMFIKVKPTTQETKSKPLLFIIVGFGIGVISGIVGAGGAFIIIPVLLALFKLPMNTVVNNSIAIAFISSVGAFFIKLMQGYIPVESAIFLIIE |
1T5J Chain:A ((259-285)) | --------------------------------------------------------------------------------------LASMYGAMAGAYYGFKNIPKEWIDGLK------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1T5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -8994 for 97 contacts (-92.7/contact) +
2D Compatibility (PS) -2542 + (NN) 1404 + (LL) 15684
1D Compatibility (HY) -2000 + (ID) 200
Total energy: 3352.0 ( 34.56 by residue)
QMean score : -0.228
|
|
|