Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKENFWSELPRPFFILAPMEDVTDIVFRHVVSEAARPDVFFTEFTNTESFCHPEGIHSVRGRL-TFSEDEHPMVAHIWGDKPEQFRETSIQLAKMGFKGIDLNMGCPVANVAKKGKGSGLILRPDVAAEIIQAT-KAGGLPVSVKTRLGYYEIDEWKDWLKHV---FEQDIANLSIHLRTRKEMSKVDAHWELI----EAIKNLRDEIAPNTLLTINGDIPDRKTGLELAEKYGIDGVMIGRGIFHNPFAFEKEPREHTSKELLDLLRLHLSLFNKYEKDEIRQFKSLRRFFKIYVRGIRGASELRHQLMNTQSIAEARALLDEFEAQMDEDVKIEL |
| 3B0V Chain:C ((25-261)) | -----------PRLSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAV-----LRGNRERLLAFRPEEHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDF-PQLTFVTNGGIRSLEEALFHLKR--VDGVMLGRAVYEDPFVLEEADR--------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B0V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98029 for 1900 contacts (-51.6/contact) +
2D Compatibility (PS) -24549 + (NN) -13003 + (LL) 8340
1D Compatibility (HY) -10800 + (ID) 3350
Total energy: -141391.0 ( -74.42 by residue)
QMean score : 0.446
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