Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEDLKESLKSLGWWDLFFAIPMFLLFAYLPNYNFITIFLNIVIIIFFSIGLILTTH-IIIDKIKSNTK
2JP3 Chain:A ((13-48))
------------------------------DWESLQLGGLIFGGLLCIAGIALALSGKCKCRRNHT--
General information:
TITO was launched using:
RESULT:
Template:
2JP3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12557 for 135 contacts (-93.0/contact) +
2D Compatibility (PS) -3416 + (NN) 221 + (LL) 2864
1D Compatibility (HY) -400 + (ID) 150
Total energy: -13438.0 ( -99.54 by residue)
QMean score : 0.432
(partial model without unconserved sides chains):
PDB file :
Tito_2JP3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JP3-query.scw
PDB file :
Tito_Scwrl_2JP3.pdb
: