Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLLKPKYQIVIAGLCLAIVAILSLMIGNTLVSPGTVIQALFNFDSENDLHDVVTGARASRTIIALLTGAALAVSGLLMQALTRNPIASPGLFGVNAGAVFFVIFSITFIQIQ-SFKMIVVIAFLGAIVVTILVVALGMFRQTLFSPHRVILAGAAIAMLFTAFTQGILIMNE-TDLQGLLFWLSGSVSLRNIWDIPWI-IPLVLILILIAFSMAAHINILMTSDDIATGLGQNIKLIKWMIIMLISMLAGISVAVAGSIVFVGLIVPNISKRLLPPNYKYLIPFTALAGAILMIISDIVARIIIKPLELPIGVVTAVIGAIVLIYIMKKGRQRL |
2QI9 Chain:A ((21-324)) | -------------VLMLLALLLSLSAGEQWISPGDWF-------TPRG-ELFVWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQGQLPNWALGLSAIAGALIITLILLRF-ARR-H-LSTSRLLLAGVALGIISSALMTWAIYFSTSVDLRQLMYWMMGGFGGVD-WRQSWLMLA-LIPVLLWISSQSRPMNMLALGEISARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILRLSGLTDHRVLLPGCALAGASALLLADIVARLALAAAELPIGVVTATLGAPVFIWLLLKA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QI9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -371309 for 2556 contacts (-145.3/contact) +
2D Compatibility (PS) -31805 + (NN) -15711 + (LL) 3056
1D Compatibility (HY) -28800 + (ID) 5050
Total energy: -449619.0 ( -175.91 by residue)
QMean score : 0.412
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