Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKVIKMLVVTLAFLLVLAGCSGNSNKQSSDNKDKETTSIKHAMGTTEIKGKPKRVVTLYQGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKD-TKIVGQEPAPNLEEISKLKPDLIVASKVRNEKVYDQLSKIAPTV--STDTVFKFKDTTKL----MGKALGKEKEAEDLLKKYDDKVAAFQKDAKAKYKDAWPLKASVVNFRADHTRIYAGGYAGEILNDLGFKRNKDLQKQVDNGKDIIQLTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESEWTSSKE---WKNLDAVKNNQVSDDLDEITWNLA-GGYKSSLKLIDDLYEKLNIEKQSK |
| 3TEF Chain:A ((51-326)) | -----------------------------------ETVTIEHRLGKTTLEQKPQRVVVIGVGALDAIDSFGIEPV-AVSKFDGTP--DYLAKYKSDKYPSAGSLFEPDFETIYTQKPDLIVIGP-RASKSYDELSKIAPTIVFAAEADQGYWESTQQQWRNLGKVFAIEPAVEAKIEQVDAQFKSIMQYNQQHKSDAMLVMSSGGNL----TTFGANSRFSSVYKDFGFSETVPVSKESSHG----DLISFEYIREHNPKTLLVVDRD------KVVTKGETNIRQTFENDLVKATTAYKNGHIA-YLDVNAWYIAISGVKATEQMVADM----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TEF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4019 for 2217 contacts (-1.8/contact) +
2D Compatibility (PS) -28303 + (NN) -9764 + (LL) 3996
1D Compatibility (HY) -13600 + (ID) 4200
Total energy: -55890.0 ( -25.21 by residue)
QMean score : 0.416
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