Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNNKVALVTGGAQGIGFKIAERLVEDGFKVAV-VDFNEEGAKAAALKLSSDGTKAIAIKADVSNRDDVFNAVRQTAAQFGDFHVMVNNAGLGPTTPIDTITEEQFKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIALGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGGMRFR |
3OSU Chain:A ((5-243)) | ----KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLR-QRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELK-----------EQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OSU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94016 for 2052 contacts (-45.8/contact) +
2D Compatibility (PS) -25865 + (NN) -9844 + (LL) 1264
1D Compatibility (HY) -16000 + (ID) 5000
Total energy: -149461.0 ( -72.84 by residue)
QMean score : 0.544
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